CDS
| Accession Number | TCMCG057C05800 |
| gbkey | CDS |
| Protein Id | XP_018469166.1 |
| Location | join(18400730..18400762,18400853..18401032,18401114..18401191,18401295..18401363,18401449..18401592,18401679..18401795,18401878..18401947,18402034..18402134,18402216..18402347,18402429..18402551,18402632..18402733,18402818..18402910) |
| Gene | LOC108840853 |
| GeneID | 108840853 |
| Organism | Raphanus sativus |
Protein
| Length | 413aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018613664.1 |
| Definition | PREDICTED: small RNA degrading nuclease 1-like [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | small RNA degrading nuclease |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14570
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0016592 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044451 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGATCATAATCTACTCACCGCCGAGAAAGATGTGTTGGAAGAGTTGGTGAAGCAAGTCCAGCTTCAAGGTCTACGAGGAGAACACGGAGGATGGATGGAATTTGTAGCTGTTTGCAACCAAAAAGATATAACACCACATAACCTTTCCAGGGTTTCCCGTGACGTGTTGGTCGCTTTTCTCACAACCTTTAAGAAGAAAGAAGATATCCAGAGACTGCAACGTCGTGCCAATAGTCTTCTAGTTGAAAAGTTGAAGCAGGAGACTCCTGAAACTAACACTCCTGAGCATACGCTTATTCGATTGACCATGAAGCATCGGGAGTTTTCGCTCGACTATTCTTTCCCGTCACTCTCCAATGACTGGTTTGTATCCGATATTGGAATGAAGTCGTCGACTGTGATGAATTCAACAGACATGATGGCTGTTGACTGCGAGATGGTTCTTTGTGAAGATGGGACTGAAGGTCTGGTTAGAGTTGGCGCTGTAGACCGTCATGGAAAGGTGATTCTTGACCAATTTGTTAAACCGGACAAACCTATTGTTGACTATAGGACAGCTATTACCGGAGTTACTGCGCTTGACATTGAAAATGTTACCGTCTCTGTGTCAGATATTCAGAAAGAACTTCAGCCCTATCTTTCTAATGGTTTTATTTTGGTTGGTCACAGTCTGAACAAAGACATGAAAGTGTTGAAGATAGATCATCCTAAAGTCATTGATACATCACTTGTGTTCATATTTTCAAATGCAAGAAATTCAAGAAAACCTTCACTCAATGACCTTTTCAAGGCGATTTTCGGTAAGGAAGTAAGAAAGGAAGGTGTTTCTCATAATTGTGTACACGACGCAGCAGCTTCGATAGATATTGCCCTTGCTTTCATAAAGAAACCTTTTCACACAACAATTACCCCATCAAAAGAGATGCTTGAAGCTGAGAAATCAAAACTGTTTATCCATAGGATCCCTTCCTATGTGCCATCTGAAAAACTGACCACTATTCTCGCTGGAGAGTTTCGTTCAAGAAACTTTAAACTTGATGTTAAGCCAGCAAAATCGCAGGGATGTAATTATTGTGCAGTTGTTGTCTTTGATAGTTCTAAAGAAGCTGATCAAGCTTTTGAAAACGTCAATGGATCCAAAGAAAGGGATTCATATGGTCTGCCACAGAAGTTGTCTGCCTTAAAGCTGAGTTCGGGATTAAGTGCTACCTGCTATGTCCGTAAAATGATGCAAGATTAA |
| Protein: MDHNLLTAEKDVLEELVKQVQLQGLRGEHGGWMEFVAVCNQKDITPHNLSRVSRDVLVAFLTTFKKKEDIQRLQRRANSLLVEKLKQETPETNTPEHTLIRLTMKHREFSLDYSFPSLSNDWFVSDIGMKSSTVMNSTDMMAVDCEMVLCEDGTEGLVRVGAVDRHGKVILDQFVKPDKPIVDYRTAITGVTALDIENVTVSVSDIQKELQPYLSNGFILVGHSLNKDMKVLKIDHPKVIDTSLVFIFSNARNSRKPSLNDLFKAIFGKEVRKEGVSHNCVHDAAASIDIALAFIKKPFHTTITPSKEMLEAEKSKLFIHRIPSYVPSEKLTTILAGEFRSRNFKLDVKPAKSQGCNYCAVVVFDSSKEADQAFENVNGSKERDSYGLPQKLSALKLSSGLSATCYVRKMMQD |